Brève Science & Vie

Christophe was interviewed by journalist Anne Debroise of the French scientific magazine Science & Vie about a recent article from the Bock lab (Zheng et al., 2018) that provides the volume of an adult Drosophila fly brain by electron microscopy. You can read the short article here (in French, subscription required) or via the screenshot below.

New preprint: Get the best 3D localization microscopy with DAISY

We have a new preprint out! It’s a collaboration with the group of Sandrine Lévêque-Fort at ISMO (Orsay, France) based on the PhD work of Clément Cabriel. They previously used supercritical-angle fluorescence to measure the height of fluorophores at the proximity of the coverslip. This technique, called Direct Optical Nanoscopy with Axially Localized Detection (DONALD), could bring the resolution down to 15 nm for 3D localization microscopy. Now they have combined the SAF-based method with cylindrical lens astigmatism to obtain a robust and precise 3D localization of fluorophores over ~1.5 µm above the coverslip, retaining the key advantafges of DONALD: drift-free, tilt-insensitive and achromatic. The new technique, called Dual-view Astigmatic Imaging with SAF Yield (DAISY 😉), allowed to image in 3D the periodic scaffold of adducin and ß-spectrin along axons of cultured neurons, as you can see on the Figure below:
Cabriel_Preprint

Farewell to Nikki

We all said goodbye to Nikki who finished her Master’s internship at the end of July. Nikki is a great student, and she managed to get a PhD position in the lab of Ruud Toonen at the Center for Neurogenomics and Cognitive  Research in Amsterdam. Good luck for this new adventure!

Dominic will join us as an ICN PhD program laureate

We had the chance of having Dominic Bingham, currently a Master’s student in Alison Twelvetree’s lab in Sheffield, apply for a PhD in the lab through the “Integrative and Clinical Neuroscience” PhD program. Congratulation to Dominic who succeeded to be one of the three laureates this year! We can’t wait to have him the lab where he will study the organization of presynaptic actin. Thanks also to the Aix-Marseille University A*MIDEX which is funding the PhD program.

Christophe talks at the French Cell Adhesion Club meeting in Strasbourg

It was a pleasure to present at the 7th Cell Adhesion Club Meeting in Strasbourg. After three fascinating days hearing about cell adhesion and related cell biological processes by top scientists of the field, it was very interesting to see how key tools and concepts can also inform cellular neurobiology. See the #Stradh18 Twitter hashtag for more, thanks to @GoetzJacky for the invite!

photo @XavierTrepat
photo @christlet

Just published: our review on the architecture of axonal actin

Marie-Jeanne and Christophe wrote a review detailing how recent discoveries renewed the understanding of axonal actin organization. In the axon shaft itself, new nano-structures such as rings, hotspots and trails have been described, but their function remains to be elucidated. At presynapses, the precise architecture of actin is still elusive, and contradicting findings have been reported regarding its function. This is an exciting time to study actin in axons!

The review is now published in Molecular and Cellular Neuroscience, and will be part of a special issue on “Membrane Trafficking and Cytoskeletal Dynamics in Neuronal Function”. If you don’t have access to the review, a preprint manuscript is available on Zenodo.

Fig.2 from Papandreou & Leterrier 2018

New preprint: Pumpy is here!

Together with the he lab of Ricardo Henriques, we’re finally ready to present #Pumpy to the world, in the form of a preprint on bioRxiv!

Pumpy (short for Pumpy McPumpface, official name NanoJ-Fluidics) is a pump array made in LEGO, controlled by an Arduino and open-source software (compatible with ImageJ/Fiji and Micro-Manager). NanoJ-Fluidics automates sample fluid exchange right on the microscope stage, allowing complex workflows using your standard chambers, tubing and reagents: live-to-fixed correlative imaging, sequential staining/imaging/washing protocols…

In one application,  we used NanoJ-Fluidics to visualize the dynamics of actin in living cells (using SRRF super-resolved processing), and to perform nanoscale imaging of actin using STORM on the same cell after online fixation and labeling with phalloidin.

 

We also used NanoJ-Fluidics for sequential multiplexed STORM/PAINT imaging, and we obtained 5-channel super-resolved images of actin, intermediate filaments, microtubules, clathrin and mitochondria in cells with minimal intervention during imaging.

 

If you are interested in making your own, head over to the NanoJ-Fluidics wiki where you will find everything:  LEGO parts, assembly instructions, control software and more!